feat(shirabe): resolve phase-b TODOs with shared ownership

Replace TODO(phase-b) placeholders (todo!() and commented-out code)
with real implementations:

- Share JsonFile via Rc<RefCell<JsonFile>> so JsonConfigSource and the
  owning command can hold the same instance (base_config_command,
  config_command, repository_command, require_command, create_project,
  remove_command, factory)
- Change InstallerInterface methods (is_installed, download, prepare,
  cleanup, get_install_path) to &mut self so initialize_vendor_dir can
  run, propagated to all installer implementations
- Pass io/config/filesystem/process by clone instead of moving or
  stubbing (auth_helper, svn_driver, curl_downloader, library_installer)
- Make TransportException Clone and store it by value in VcsRepository
- Clone operations in Transaction sort, root_aliases/temporary_constraints
  in RepositorySet::create_pool, and share CompletePackage via handle in
  PlatformRepository
- Wire up set_option, set_requires/set_dev_requires, installation manager
  setters, BumpCommand::set_composer, and clean_backups/set_local_phar

1 files changed, 12 insertions, 8 deletions

diff --git a/crates/shirabe/src/command/reinstall_command.rs b/crates/shirabe/src/command/reinstall_command.rs
index 6e4cd7b..e72a177 100644
--- a/crates/shirabe/src/command/reinstall_command.rs
+++ b/crates/shirabe/src/command/reinstall_command.rs
@@ -195,17 +195,21 @@ impl ReinstallCommand {
         let download_manager = composer.get_download_manager();
         let package = composer.get_package();
 
-        // TODO(phase-b): InstallationManager setters need &mut self; conflicts with the &installation_manager / &local_repo / &package borrows held below; needs shared-ownership refactor
-        let _no_progress = !input
-            .borrow()
-            .get_option("no-progress")
-            .as_bool()
-            .unwrap_or(false);
-        let _no_plugins = input
+        installation_manager.borrow_mut().set_output_progress(
+            !input
+                .borrow()
+                .get_option("no-progress")
+                .as_bool()
+                .unwrap_or(false),
+        );
+        if input
             .borrow()
             .get_option("no-plugins")
             .as_bool()
-            .unwrap_or(false);
+            .unwrap_or(false)
+        {
+            installation_manager.borrow_mut().disable_plugins();
+        }
 
         download_manager
             .borrow_mut()